Design antibody CDR sequences using inverse folding
AntiFold designs CDR sequences for given antibody backbone structures using an inverse folding model fine-tuned from ESM-IF1 on antibody crystal structures. Generate diverse, high-affinity CDR variants for therapeutic antibody optimization.
/v1/antibodies/designimport requests
API_KEY = "sk-sci-your-key-here"
url = "https://scirouter.ai/v1/antibodies/design"
response = requests.post(url, json={
"pdb": open("antibody.pdb").read(),
"design_cdrs": ["H3", "L3"],
"num_sequences": 10,
"temperature": 0.2
}, headers={"Authorization": f"Bearer {API_KEY}"})
result = response.json()
for design in result["designs"]:
print(f"Score: {design['score']:.3f}")
print(f" H3: {design['cdr_sequences']['H3']}")
print(f" L3: {design['cdr_sequences']['L3']}")Therapeutic antibody CDR optimization
Antibody humanization with CDR grafting
Affinity maturation sequence design
Generating diverse CDR libraries for screening