ProteinsCPU1 credits

AbLang2 — Antibody Chain Embeddings

Generate 768-dim antibody chain embeddings for ML workflows

Convert any heavy or light chain sequence into a dense 768-dimensional vector using AbLang2, the antibody-specific language model from Oxford OPIG. Use these embeddings for CDR-aware similarity search, naturalness scoring, and downstream antibody engineering ML tasks.

$0.01
per API call
1
credits per call
/v1/antibody-lab/embed
API endpoint

Features

768-dimensional antibody chain embeddings
Works on heavy or light chain VH/VL sequences
CPU-only — no GPU needed
Captures CDR-aware context
Deterministic hash fallback for reliability
Complementary to /v1/antibody-lab/humanness scoring

Quick Start

AbLang2 — Python Examplepython
import requests

API_KEY = "sk-sci-your-key-here"
url = "https://scirouter.ai/v1/antibody-lab/embed"

# Trastuzumab VH
vh = "EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKG" \
     "RFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS"

response = requests.post(
    url,
    json={"sequence": vh},
    headers={"Authorization": f"Bearer {API_KEY}"}
)
data = response.json()["data"]
print(f"Dimension: {data['dimension']}")  # 768
print(f"Model: {data['model']}")          # antibody_ablang2

Use Cases

1

Antibody similarity search against libraries

2

Clustering antibodies by epitope / germline

3

Naturalness scoring (vs. noise baseline)

4

CDR-aware variant screening

Start Using AbLang2

500 free credits every month. No credit card required.